Transcript: ENST00000272418.2 MRPS5-001

Description

mitochondrial ribosomal protein S5 [Source:HGNC Symbol;Acc:14498]

Gene Synonyms

MRP-S5, S5mt

Location

Chromosome 2: 95,752,952-95,787,745 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 12 domains and features, is associated with 14810 variant alleles and maps to 545 oligo probes.

Gene

This transcript is a product of gene ENSG00000144029.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000272418.2	MRPS5-001	1652	430aa	ENSP00000272418.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2010	P82675	NM_031902.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000345084.5	MRPS5-002	1359	251aa	ENSP00000341660.5	Nonsense mediated decay		P82675	-	-
ENST00000475040.1	MRPS5-005	713	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000482821.1	MRPS5-004	3680	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000475895.1	MRPS5-003	1672	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000461916.1	MRPS5-007	793	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000482568.1	MRPS5-008	711	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000464458.1	MRPS5-006	648	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 1,652 bps, Translation length: 430 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P82675

CCDS

This transcript is a member of the Human CCDS set: CCDS2010

Version

ENST00000272418.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000252772 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000272418.2 MRPS5-001

Summary