Transcript: ENST00000421383.1 LBR-003

Description

lamin B receptor [Source:HGNC Symbol;Acc:6518]

Gene Synonyms

DHCR14B, LMN2R, PHA, TDRD18

Location

Chromosome 1: 225,611,623-225,615,599 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 2 domains and features, is associated with 1872 variant alleles and maps to 76 oligo probes.

Gene

This transcript is a product of gene ENSG00000143815.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000338179.2	LBR-201	3774	615aa	ENSP00000339883.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1545	C9JES9 C9JXK0 Q14739	NM_194442.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000272163.4	LBR-001	3745	615aa	ENSP00000272163.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1545	C9JES9 C9JXK0 Q14739	NM_002296.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000425080.1	LBR-002	874	213aa	ENSP00000388059.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JES9 C9JXK0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000421383.1	LBR-003	736	51aa	ENSP00000416554.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JES9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000441022.1	LBR-006	536	107aa	ENSP00000415428.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000424022.1	LBR-007	478	128aa	ENSP00000397817.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C108	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000487054.1	LBR-005	731	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488632.1	LBR-004	425	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 736 bps, Translation length: 51 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000421383.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000091400 (version 1)

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Transcript: ENST00000421383.1 LBR-003

Summary