Transcript: ENST00000346569.6 ECM1-013

Description

extracellular matrix protein 1 [Source:HGNC Symbol;Acc:3153]

Gene Synonyms

URBWD

Location

Chromosome 1: 150,480,583-150,486,036 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 10 domains and features, is associated with 2929 variant alleles and maps to 408 oligo probes.

Gene

This transcript is a product of gene ENSG00000143369.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000369049.4	ECM1-012	1925	567aa	ENSP00000358045.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55632	Q16610	NM_001202858.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000369047.4	ECM1-011	2070	540aa	ENSP00000358043.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS953	C8CHS3 Q16610	NM_004425.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000346569.6	ECM1-013	1444	415aa	ENSP00000271630.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS954	Q16610	NM_022664.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000470432.1	ECM1-014	3066	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496744.1	ECM1-015	1030	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000498579.1	ECM1-010	943	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000490346.1	ECM1-009	502	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,444 bps, Translation length: 415 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q16610

CCDS

This transcript is a member of the Human CCDS set: CCDS954

Version

ENST00000346569.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000035834 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000346569.6 ECM1-013

Summary