Transcript: ENST00000477897.1 PSMA5-005

Description

proteasome (prosome, macropain) subunit, alpha type, 5 [Source:HGNC Symbol;Acc:9534]

Gene Synonyms

PSC5, ZETA

Location

About this transcript

This transcript has 2 exons, is associated with 173 variant alleles and maps to 118 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000271308.4	PSMA5-001	3729	241aa	ENSP00000271308.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS799	P28066	NM_002790.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538610.1	PSMA5-201	985	183aa	ENSP00000440618.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55619	P28066	NM_001199774.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000490870.1	PSMA5-002	1667	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484563.1	PSMA5-003	1503	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477897.1	PSMA5-005	275	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000491287.1	PSMA5-004	225	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 275 bps,

Version

ENST00000477897.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000033196 (version 1)