Transcript: ENST00000271308.4 PSMA5-001

Description

proteasome (prosome, macropain) subunit, alpha type, 5 [Source:HGNC Symbol;Acc:9534]

Gene Synonyms

PSC5, ZETA

Location

About this transcript

This transcript has 9 exons, is annotated with 9 domains and features, is associated with 11359 variant alleles and maps to 602 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000271308.4	PSMA5-001	3729	241aa	ENSP00000271308.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS799	P28066	NM_002790.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538610.1	PSMA5-201	985	183aa	ENSP00000440618.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55619	P28066	NM_001199774.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000490870.1	PSMA5-002	1667	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484563.1	PSMA5-003	1503	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477897.1	PSMA5-005	275	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000491287.1	PSMA5-004	225	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 3,729 bps, Translation length: 241 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P28066

CCDS

This transcript is a member of the Human CCDS set: CCDS799

Version

ENST00000271308.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000033192 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.