Transcript: ENST00000318837.6 IGSF3-002

Description

immunoglobulin superfamily, member 3 [Source:HGNC Symbol;Acc:5950]

Gene Synonyms

EWI-3, EWI3, KIAA0466, MGC117164, V8

Location

About this transcript

This transcript has 11 exons, is annotated with 52 domains and features, is associated with 35850 variant alleles and maps to 636 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000369483.1	IGSF3-201	7253	1214aa	ENSP00000358495.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30814	O75054	NM_001542.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000369486.3	IGSF3-001	7254	1194aa	ENSP00000358498.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30813	O75054	NM_001007237.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000318837.6	IGSF3-002	3842	1214aa	ENSP00000321184.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30814	O75054	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000481589.1	IGSF3-003	268	5aa	ENSP00000474657.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 3,842 bps, Translation length: 1,214 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O75054

CCDS

This transcript is a member of the Human CCDS set: CCDS30814

Version

ENST00000318837.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000059041 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.