Transcript: ENST00000487906.1 PIGK-004

Description

phosphatidylinositol glycan anchor biosynthesis, class K [Source:HGNC Symbol;Acc:8965]

Gene Synonyms

GPI8, hGPI8

Location

Chromosome 1: 77,557,887-77,635,004 reverse strand.

About this transcript

This transcript has 7 exons, is associated with 30605 variant alleles and maps to 359 oligo probes.

Gene

This transcript is a product of gene ENSG00000142892.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000370812.3	PIGK-001	4596	395aa	ENSP00000359848.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS674	Q92643	NM_005482.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000445065.1	PIGK-002	4318	301aa	ENSP00000388854.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AK81	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000359130.1	PIGK-003	1926	332aa	ENSP00000352041.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NEM5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000370813.5	PIGK-201	1357	319aa	ENSP00000359849.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4E2M3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000487906.1	PIGK-004	933	27aa	ENSP00000474518.1	Nonsense mediated decay		S4R3M5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000478391.1	PIGK-005	737	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 2, Transcript length: 933 bps, Translation length: 27 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000487906.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000026690 (version 2)

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Transcript: ENST00000487906.1 PIGK-004

Summary