Transcript: ENST00000472249.2 WDTC1-004

Description

WD and tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:29175]

Gene Synonyms

ADP, DCAF9, KIAA1037

Location

About this transcript

This transcript has 3 exons, is annotated with 10 domains and features, is associated with 826 variant alleles and maps to 93 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000361771.3	WDTC1-001	4275	676aa	ENSP00000355317.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS296	H0YEI6 Q8N5D0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000319394.3	WDTC1-201	4805	677aa	ENSP00000317971.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS60044	H0YEI6 Q8N5D0	NM_015023.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000447062.2	WDTC1-003	3115	615aa	ENSP00000434578.1	Nonsense mediated decay		Q8N5D0	-	-
ENST00000472249.2	WDTC1-004	628	125aa	ENSP00000435903.1	Nonsense mediated decay		H0YEI6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000491239.2	WDTC1-002	5149	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 628 bps, Translation length: 125 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000472249.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000012792 (version 4)