Description
PR domain containing 16 [Source:HGNC Symbol;Acc:14000]
Gene Synonyms
CMD1LL, KIAA1675, LVNC8, MEL1, MGC166915, PFM13
Location
Chromosome 1: 3,160,696-3,303,482 forward strand.
About this transcript
This transcript has 3 exons, is annotated with 3 domains and features, is associated with 71772 variant alleles and maps to 68 oligo probes.
Gene
This transcript is a product of gene ENSG00000142611.12 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000270722.5 | PRDM16-001 | 8690 | 1276aa | ENSP00000270722.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS41236 | Q9HAZ2 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000378398.3 | PRDM16-201 | 8721 | 1276aa | ENSP00000367651.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YA13 Q9HAZ2 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000441472.2 | PRDM16-202 | 8718 | 1275aa | ENSP00000407968.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8WEV3 H0YA13 | NM_022114.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000442529.2 | PRDM16-203 | 8661 | 1256aa | ENSP00000405253.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D3YTA5 | NM_199454.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000378391.2 | PRDM16-003 | 5447 | 1257aa | ENSP00000367643.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44048 | Q9HAZ2 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000511072.1 | PRDM16-007 | 4282 | 1178aa | ENSP00000426975.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RDW0 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000514189.1 | PRDM16-008 | 4236 | 1177aa | ENSP00000421400.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RFY3 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000509860.1 | PRDM16-002 | 3737 | 1084aa | ENSP00000425796.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YA13 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000463591.1 | PRDM16-004 | 384 | 53aa | ENSP00000476002.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | U3KQL6 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000512462.1 | PRDM16-009 | 3723 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000378389.5 | PRDM16-005 | 1142 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000607632.1 | PRDM16-010 | 581 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000606170.1 | PRDM16-011 | 557 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |