Transcript: ENST00000344150.4 CARM1-003

Description

coactivator-associated arginine methyltransferase 1 [Source:HGNC Symbol;Acc:23393]

Gene Synonyms

PRMT4

Location

Chromosome 19: 10,982,379-11,033,397 forward strand.

About this transcript

This transcript has 15 exons, is annotated with 11 domains and features, is associated with 24674 variant alleles and maps to 502 oligo probes.

Gene

This transcript is a product of gene ENSG00000142453.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000327064.4	CARM1-002	3032	608aa	ENSP00000325690.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12250	Q86X55	NM_199141.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000344150.4	CARM1-003	2722	585aa	ENSP00000340934.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q86X55	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000586298.1	CARM1-010	674	176aa	ENSP00000467761.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EQB9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000588947.1	CARM1-008	468	120aa	ENSP00000465417.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EK20	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000586221.1	CARM1-001	2766	343aa	ENSP00000467746.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000590699.1	CARM1-004	2240	161aa	ENSP00000467420.1	Nonsense mediated decay		K7EIQ8 K7EPK1 K7ERM3	-	-
ENST00000589693.1	CARM1-005	601	92aa	ENSP00000468319.1	Nonsense mediated decay		K7ERM3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000590039.1	CARM1-009	596	111aa	ENSP00000464852.1	Nonsense mediated decay		K7EIQ8 K7ERM3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000586508.1	CARM1-006	1050	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000592516.1	CARM1-007	696	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 2,722 bps, Translation length: 585 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q86X55

Version

ENST00000344150.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000452628 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000344150.4 CARM1-003

Summary