Transcript: ENST00000270162.6 SIK1-001

Description

salt-inducible kinase 1 [Source:HGNC Symbol;Acc:11142]

Gene Synonyms

MSK, SIK, SNF1LK, msk

Location

About this transcript

This transcript has 14 exons, is annotated with 19 domains and features, is associated with 3973 variant alleles and maps to 595 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000270162.6	SIK1-001	4712	783aa	ENSP00000270162.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33575	P57059	NM_173354.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000478426.1	SIK1-002	515	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 13, Transcript length: 4,712 bps, Translation length: 783 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P57059

CCDS

This transcript is a member of the Human CCDS set: CCDS33575

Version

ENST00000270162.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000195654 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.