Transcript: ENST00000382743.4 SIRT3-001

Description

sirtuin 3 [Source:HGNC Symbol;Acc:14931]

Gene Synonyms

SIR2L3

Location

Chromosome 11: 215,458-236,431 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 16 domains and features, is associated with 10290 variant alleles and maps to 597 oligo probes.

Gene

This transcript is a product of gene ENSG00000142082.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000382743.4	SIRT3-001	2543	399aa	ENSP00000372191.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7691	E9PM52 E9PNA0 Q9NTG7	NM_012239.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000525319.1	SIRT3-003	1475	318aa	ENSP00000435464.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PK80 E9PM52 E9PNA0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000524564.1	SIRT3-002	1395	353aa	ENSP00000432937.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PN58	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000532956.1	SIRT3-004	1235	345aa	ENSP00000433077.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PM52 E9PM75 E9PNA0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000529382.1	SIRT3-008	1225	257aa	ENSP00000437216.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53590	E9PM52 E9PNA0 Q9NTG7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000528469.1	SIRT3-009	763	93aa	ENSP00000432857.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PM52 E9PNA0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000525237.1	SIRT3-010	430	18aa	ENSP00000436085.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000525776.1	SIRT3-011	365	23aa	ENSP00000433132.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PM52	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000529937.1	SIRT3-006	2627	134aa	ENSP00000434747.1	Nonsense mediated decay		B7WNN4	-	-
ENST00000532837.1	SIRT3-005	1588	46aa	ENSP00000433899.1	Nonsense mediated decay		E9PIT6	-	-
ENST00000526854.1	SIRT3-016	785	95aa	ENSP00000435505.1	Nonsense mediated decay		E9PJS6	-	-
ENST00000529055.1	SIRT3-015	779	46aa	ENSP00000437179.1	Nonsense mediated decay		E9PIT6	-	-
ENST00000530067.1	SIRT3-014	681	46aa	ENSP00000435014.1	Nonsense mediated decay		E9PIT6	-	-
ENST00000528702.1	SIRT3-007	1251	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000531753.1	SIRT3-012	593	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000534381.1	SIRT3-013	561	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 2,543 bps, Translation length: 399 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NTG7

CCDS

This transcript is a member of the Human CCDS set: CCDS7691

Version

ENST00000382743.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000239288 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000382743.4 SIRT3-001

Summary