Transcript: ENST00000316660.6 PMAIP1-001

Description

phorbol-12-myristate-13-acetate-induced protein 1 [Source:HGNC Symbol;Acc:9108]

Gene Synonyms

APR, NOXA

Location

About this transcript

This transcript has 2 exons, is annotated with 3 domains and features, is associated with 1958 variant alleles and maps to 445 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000316660.6	PMAIP1-001	1948	54aa	ENSP00000326119.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11975	Q13794	NM_021127.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000269518.9	PMAIP1-002	1262	136aa	ENSP00000269518.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8N589	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000590596.1	PMAIP1-003	804	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 1,948 bps, Translation length: 54 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q13794

CCDS

This transcript is a member of the Human CCDS set: CCDS11975

Version

ENST00000316660.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000256137 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.