Transcript: ENST00000494546.1 CBX4-003

Description

chromobox homolog 4 [Source:HGNC Symbol;Acc:1554]

Gene Synonyms

NBP16, PC2, hPC2

Location

About this transcript

This transcript has 3 exons, is associated with 1032 variant alleles and maps to 101 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000269397.4	CBX4-001	2664	560aa	ENSP00000269397.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32758	O00257	NM_003655.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000448310.1	CBX4-002	718	60aa	ENSP00000415348.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8WCW6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000495122.1	CBX4-004	490	90aa	ENSP00000461198.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000494546.1	CBX4-003	432	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 432 bps,

Version

ENST00000494546.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000318009 (version 1)