Transcript: ENST00000269298.5 SAT2-002

Description

spermidine/spermine N1-acetyltransferase family member 2 [Source:HGNC Symbol;Acc:23160]

Gene Synonyms

SSAT2

Location

Chromosome 17: 7,529,552-7,531,173 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 6 domains and features, is associated with 922 variant alleles and maps to 293 oligo probes.

Gene

This transcript is a product of gene ENSG00000141504.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000269298.5	SAT2-002	946	170aa	ENSP00000269298.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11116	Q96F10	NM_133491.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000573566.1	SAT2-009	640	136aa	ENSP00000458385.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L0W4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000571074.1	SAT2-005	860	41aa	ENSP00000459985.1	Nonsense mediated decay		I3L2W7	-	-
ENST00000575826.1	SAT2-012	838	41aa	ENSP00000458818.1	Nonsense mediated decay		I3L2W7	-	-
ENST00000380466.2	SAT2-001	974	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000570850.1	SAT2-011	685	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000576686.1	SAT2-004	582	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000576846.1	SAT2-003	1563	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000571195.1	SAT2-010	814	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000575114.1	SAT2-006	803	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000570914.1	SAT2-014	765	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000573930.1	SAT2-008	711	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000572224.1	SAT2-007	669	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000576579.1	SAT2-013	535	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 946 bps, Translation length: 170 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96F10

CCDS

This transcript is a member of the Human CCDS set: CCDS11116

Version

ENST00000269298.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000440078 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000269298.5 SAT2-002

Summary