Transcript: ENST00000578121.1 TAF4B-001

Description

TAF4b RNA polymerase II, TATA box binding protein (TBP)-associated factor, 105kDa [Source:HGNC Symbol;Acc:11538]

Gene Synonyms

TAF2C2, TAFII105

Location

About this transcript

This transcript has 15 exons, is annotated with 17 domains and features, is associated with 71787 variant alleles and maps to 452 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000269142.5	TAF4B-002	5260	862aa	ENSP00000269142.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42421	A4PBF8 B4DYT3 Q92750	NM_005640.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000578121.1	TAF4B-001	3204	867aa	ENSP00000462980.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A4PBF8 J3KTH2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000400466.2	TAF4B-201	2346	618aa	ENSP00000383314.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A4PBF8 Q92750	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000418698.3	TAF4B-003	4431	618aa	ENSP00000389365.3	Nonsense mediated decay		A4PBF8 Q92750	-	-

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 3,204 bps, Translation length: 867 residues

Version

ENST00000578121.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000446258 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.