Transcript: ENST00000585361.1 G6PC3-003

Description

glucose 6 phosphatase, catalytic, 3 [Source:HGNC Symbol;Acc:24861]

Gene Synonyms

SCN4, UGRP

Location

Chromosome 17: 42,148,119-42,153,668 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 4 domains and features, is associated with 2951 variant alleles and maps to 421 oligo probes.

Gene

This transcript is a product of gene ENSG00000141349.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000269097.4	G6PC3-001	1533	346aa	ENSP00000269097.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11476	K7ENK1 K7EQ13 Q9BUM1	NM_138387.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000590253.1	G6PC3-004	841	69aa	ENSP00000465111.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000591696.1	G6PC3-007	805	243aa	ENSP00000468677.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ENK1 K7EQ13 K7ESE6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000588558.1	G6PC3-002	1718	72aa	ENSP00000467624.1	Nonsense mediated decay		K7EQ13	-	-
ENST00000585361.1	G6PC3-003	1572	73aa	ENSP00000466983.1	Nonsense mediated decay		K7ENK1 K7EQ13	-	-
ENST00000593115.1	G6PC3-006	710	73aa	ENSP00000466821.1	Nonsense mediated decay		K7ENK1 K7EQ13	-	-
ENST00000585962.1	G6PC3-005	3027	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000590639.1	G6PC3-008	851	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 1, Transcript length: 1,572 bps, Translation length: 73 residues

Version

ENST00000585361.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000457678 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000585361.1 G6PC3-003

Summary