Transcript: ENST00000584809.1 LRRC46-005

Description

leucine rich repeat containing 46 [Source:HGNC Symbol;Acc:25047]

Gene Synonyms

MGC16309

Location

About this transcript

This transcript has 2 exons, is associated with 1275 variant alleles and maps to 140 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000269025.4	LRRC46-001	1922	321aa	ENSP00000269025.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11518	A8K9Q0 Q96FV0	NM_033413.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000584580.1	LRRC46-002	2239	47aa	ENSP00000463232.1	Nonsense mediated decay		J3QQW4	-	-
ENST00000579971.1	LRRC46-004	872	98aa	ENSP00000462585.1	Nonsense mediated decay		J3KSP7	-	-
ENST00000579742.1	LRRC46-003	847	47aa	ENSP00000463930.1	Nonsense mediated decay		J3QQW4	-	-
ENST00000584809.1	LRRC46-005	859	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 859 bps,

Version

ENST00000584809.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000441381 (version 1)