EMBL-EBI User Survey 2024

Do data resources managed by EMBL-EBI and our collaborators make a difference to your work?

Please take 10 minutes to fill in our annual user survey, and help us make the case for why sustaining open data resources is critical for life sciences research.

Survey link: https://www.surveymonkey.com/r/HJKYKTT?channel=[webpage]

Human (GRCh37.p13)
Description

3-phosphoinositide dependent protein kinase-1 [Source:HGNC Symbol;Acc:8816]

Gene Synonyms

PDK1, PDPK2, PRO0461

Location
About this transcript

This transcript has 2 exons, is associated with 236 variant alleles and maps to 111 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeqFlags
ENST00000342085.4PDPK1-0017241556aaENSP00000344220.4
 
Protein coding
CCDS10472E9PER6 H3BQ10 O15530
Q9UPJ7 Q9UPJ8
NM_002613.4Ensembl CanonicalGENCODE basic
ENST00000268673.7PDPK1-0024728429aaENSP00000268673.7
 
Protein coding
CCDS10473O15530 Q9UPJ7 NM_031268.5GENCODE basic
ENST00000389224.3PDPK1-0032416529aaENSP00000373876.3
 
Protein coding
E9PER6 H3BQ10 Q9UPJ7
-GENCODE basic
ENST00000354836.5PDPK1-2011819532aaENSP00000346895.5
 
Protein coding
C9JWR9 H3BQ10 -GENCODE basic
ENST00000441549.3PDPK1-0131729454aaENSP00000395357.3
 
Protein coding
CCDS58411H3BQ10 O15530 Q9UPJ8
NM_001261816.1GENCODE basic
ENST00000461815.1PDPK1-008611149aaENSP00000455551.1
 
Protein coding
H3BQ10 -CDS 3' incomplete
ENST00000566659.1PDPK1-01545188aaENSP00000455492.1
 
Protein coding
H3BPW1 -CDS 3' incomplete
ENST00000474706.2PDPK1-00669935aaENSP00000455025.1
 
Nonsense mediated decay
H3BNV5 --
ENST00000492021.2PDPK1-00755255aaENSP00000455684.1
 
Nonsense mediated decay
H3BQA3 --
ENST00000478708.2PDPK1-01244540aaENSP00000455438.1
 
Nonsense mediated decay
--CDS 5' incomplete
ENST00000471311.1PDPK1-011621No protein-
 
Processed transcript
---
ENST00000561962.1PDPK1-017570No protein-
 
Processed transcript
---
ENST00000460496.1PDPK1-009569No protein-
 
Processed transcript
---
ENST00000462923.2PDPK1-016550No protein-
 
Processed transcript
---
ENST00000464702.2PDPK1-010511No protein-
 
Processed transcript
---
ENST00000569721.1PDPK1-018330No protein-
 
Processed transcript
---
ENST00000491073.1PDPK1-0052387No protein-
 
Retained intron
---
ENST00000570136.1PDPK1-0141125No protein-
 
Retained intron
---
ENST00000602572.1PDPK1-0193No protein-
 
Retained intron
---
Statistics

Exons: 2, Coding exons: 0, Transcript length: 330 bps,

Version

ENST00000569721.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
OTTHUMT00000436102 (version 1)