Transcript: ENST00000565171.1 TXNL4B-004

Description

thioredoxin-like 4B [Source:HGNC Symbol;Acc:26041]

Gene Synonyms

DIM2, DLP, Dim2, FLJ20511

Location

Chromosome 16: 72,120,614-72,127,451 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 4 domains and features, is associated with 3594 variant alleles and maps to 192 oligo probes.

Gene

This transcript is a product of gene ENSG00000140830.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000268483.3	TXNL4B-001	2556	149aa	ENSP00000268483.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10906	H3BUL8 Q9NX01	NM_017853.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000423037.1	TXNL4B-201	2490	149aa	ENSP00000408130.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10906	H3BUL8 Q9NX01	NM_001142317.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000426362.2	TXNL4B-003	965	149aa	ENSP00000392310.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10906	H3BUL8 Q9NX01	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000562153.1	TXNL4B-002	581	117aa	ENSP00000454635.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BN11 H3BUL8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000569767.1	TXNL4B-005	546	94aa	ENSP00000457699.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BUL8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000565171.1	TXNL4B-004	684	57aa	ENSP00000455550.1	Nonsense mediated decay		H3BQ09	-	-

Summary

Statistics

Exons: 5, Coding exons: 2, Transcript length: 684 bps, Translation length: 57 residues

Version

ENST00000565171.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000423172 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000565171.1 TXNL4B-004

Summary