Transcript: ENST00000539113.1 ST8SIA2-002

Description

ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:HGNC Symbol;Acc:10870]

Gene Synonyms

HsT19690, SIAT8B, ST8SIA-II, STX

Location

About this transcript

This transcript has 5 exons, is annotated with 7 domains and features, is associated with 30195 variant alleles and maps to 232 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000268164.3	ST8SIA2-001	5708	375aa	ENSP00000268164.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10372	B2R9U8 Q92186	NM_006011.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539113.1	ST8SIA2-002	1089	354aa	ENSP00000437382.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C6G488	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000555434.1	ST8SIA2-003	998	332aa	ENSP00000450851.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V2T1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000556382.1	ST8SIA2-004	807	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,089 bps, Translation length: 354 residues

Version

ENST00000539113.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000414854 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.