Transcript: ENST00000564388.1 RLBP1-004

Description

retinaldehyde binding protein 1 [Source:HGNC Symbol;Acc:10024]

Gene Synonyms

CRALBP

Location

About this transcript

This transcript has 2 exons, is associated with 900 variant alleles and maps to 101 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000268125.5	RLBP1-001	1810	317aa	ENSP00000268125.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32324	P12271	NM_000326.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000563254.1	RLBP1-005	609	108aa	ENSP00000454740.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000567787.1	RLBP1-002	782	71aa	ENSP00000457251.1	Nonsense mediated decay		H3BTN3	-	-
ENST00000564388.1	RLBP1-004	369	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 369 bps,

Version

ENST00000564388.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000421139 (version 1)