Transcript: ENST00000558720.1 SRP14-005

Description

signal recognition particle 14kDa (homologous Alu RNA binding protein) [Source:HGNC Symbol;Acc:11299]

Gene Synonyms

ALURBP, MGC14326

Location

Chromosome 15: 40,328,243-40,331,251 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 3 domains and features, is associated with 1845 variant alleles and maps to 386 oligo probes.

Gene

This transcript is a product of gene ENSG00000140319.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000267884.6	SRP14-001	1077	136aa	ENSP00000267884.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42017	H0YLW0 P37108	NM_003134.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000558720.1	SRP14-005	780	56aa	ENSP00000453361.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YLW0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000559081.1	SRP14-007	578	115aa	ENSP00000453120.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YLA2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000560773.1	SRP14-004	468	56aa	ENSP00000452756.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YLW0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000558527.1	SRP14-002	791	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000559439.1	SRP14-006	743	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000559475.1	SRP14-008	466	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000558243.1	SRP14-003	770	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 780 bps, Translation length: 56 residues

Version

ENST00000558720.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000418264 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000558720.1 SRP14-005

Summary