Transcript: ENST00000267859.3 BNIP2-001

Description

BCL2/adenovirus E1B 19kDa interacting protein 2 [Source:HGNC Symbol;Acc:1083]

Gene Synonyms

BNIP-2, NIP2, Nip2

Location

Chromosome 15: 59,951,345-59,981,733 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 9 domains and features, is associated with 16623 variant alleles and maps to 770 oligo probes.

Gene

This transcript is a product of gene ENSG00000140299.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000267859.3	BNIP2-001	6325	435aa	ENSP00000267859.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10174	J3KN59	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000607373.1	BNIP2-012	1851	314aa	ENSP00000475320.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q12982	NM_004330.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000415213.2	BNIP2-008	1509	376aa	ENSP00000412767.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q12982	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000439052.1	BNIP2-006	1305	204aa	ENSP00000393644.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C096	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000448414.1	BNIP2-004	806	87aa	ENSP00000398364.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000478981.1	BNIP2-007	1415	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000417312.1	BNIP2-003	636	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464390.1	BNIP2-005	967	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000477543.1	BNIP2-002	863	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000560458.1	BNIP2-011	832	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000557987.1	BNIP2-009	603	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000560776.1	BNIP2-010	323	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 6,325 bps, Translation length: 435 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS10174

Version

ENST00000267859.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000256069 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000267859.3 BNIP2-001

Summary