Transcript: ENST00000380902.4 SLC27A2-002

Description

solute carrier family 27 (fatty acid transporter), member 2 [Source:HGNC Symbol;Acc:10996]

Gene Synonyms

ACSVL1, FACVL1, FATP2, HsT17226, VLACS, VLCS, hFACVL1

Location

About this transcript

This transcript has 9 exons, is annotated with 11 domains and features, is associated with 23617 variant alleles and maps to 365 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000267842.5	SLC27A2-001	2394	620aa	ENSP00000267842.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10133	G3V1R7 O14975	NM_003645.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000380902.4	SLC27A2-002	2181	567aa	ENSP00000370289.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53943	O14975	NM_001159629.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544960.1	SLC27A2-003	2025	385aa	ENSP00000444549.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V1R7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000559938.1	SLC27A2-004	353	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 2,181 bps, Translation length: 567 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O14975

CCDS

This transcript is a member of the Human CCDS set: CCDS53943

Version

ENST00000380902.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000418284 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.