Transcript: ENST00000267568.4 PTGR2-003

Description

prostaglandin reductase 2 [Source:HGNC Symbol;Acc:20149]

Gene Synonyms

FLJ39091, HEL-S-298, PGR2, ZADH1

Location

Chromosome 14: 74,318,650-74,352,162 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 10 domains and features, is associated with 14556 variant alleles and maps to 445 oligo probes.

Gene

This transcript is a product of gene ENSG00000140043.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000555661.1	PTGR2-001	3851	351aa	ENSP00000452280.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9820	G3V2R9 Q8N8N7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000267568.4	PTGR2-003	2559	351aa	ENSP00000267568.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9820	G3V2R9 Q8N8N7	NM_152444.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000555228.1	PTGR2-004	2543	351aa	ENSP00000450975.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9820	G3V2R9 Q8N8N7	NM_001146155.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000553813.1	PTGR2-008	1351	217aa	ENSP00000450824.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V2R9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000555976.1	PTGR2-007	516	130aa	ENSP00000450517.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V288	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000553326.1	PTGR2-002	905	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000556219.1	PTGR2-005	4859	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 2,559 bps, Translation length: 351 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8N8N7

CCDS

This transcript is a member of the Human CCDS set: CCDS9820

Version

ENST00000267568.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000412578 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000267568.4 PTGR2-003

Summary