Transcript: ENST00000555952.1 FRMD6-008

Description

FERM domain containing 6 [Source:HGNC Symbol;Acc:19839]

Gene Synonyms

C14orf31, EX1, MGC17921, Willin, c14_5320, willin

Location

Chromosome 14: 52,021,378-52,046,015 forward strand.

About this transcript

This transcript has 3 exons, is associated with 9901 variant alleles and maps to 47 oligo probes.

Gene

This transcript is a product of gene ENSG00000139926.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000344768.5	FRMD6-002	2972	622aa	ENSP00000343899.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58318	G3V3V8 G3V517 Q96NE9	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395718.2	FRMD6-001	4828	614aa	ENSP00000379068.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9704	G3V4T7 G3V517 Q96NE9	NM_152330.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000356218.4	FRMD6-003	4768	614aa	ENSP00000348550.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9704	G3V4T7 G3V517 Q96NE9	NM_001042481.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554167.1	FRMD6-013	4176	545aa	ENSP00000451977.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V4T7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000553556.1	FRMD6-005	1679	264aa	ENSP00000452529.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58319	Q96NE9	NM_001267047.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000555197.1	FRMD6-018	685	205aa	ENSP00000451157.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YJC1	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000555936.1	FRMD6-014	624	120aa	ENSP00000451453.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V3V8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000555703.1	FRMD6-006	573	143aa	ENSP00000450735.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V2L4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000554778.1	FRMD6-012	569	61aa	ENSP00000452122.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V517	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000557405.1	FRMD6-017	495	129aa	ENSP00000450667.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YJ19	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000557103.1	FRMD6-009	759	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000554745.1	FRMD6-011	564	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000556137.1	FRMD6-007	563	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000555952.1	FRMD6-008	535	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000557183.1	FRMD6-016	527	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000557001.1	FRMD6-010	510	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000557522.1	FRMD6-004	5123	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000554495.1	FRMD6-015	564	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 535 bps,

Version

ENST00000555952.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000411559 (version 1)

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Transcript: ENST00000555952.1 FRMD6-008

Summary