Description
integrin, beta 7 [Source:HGNC Symbol;Acc:6162]
Location
Chromosome 12: 53,585,110-53,601,000 reverse strand.
About this transcript
This transcript has 14 exons, is annotated with 28 domains and features, is associated with 7771 variant alleles and maps to 494 oligo probes.
Gene
This transcript is a product of gene ENSG00000139626.11 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000267082.5 | ITGB7-004 | 2867 | 798aa | ENSP00000267082.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8849 | B7Z506 F8VNX4 F8W186 H3BRM2 P26010 | NM_000889.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000422257.3 | ITGB7-005 | 2791 | 798aa | ENSP00000408741.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8849 | B7Z506 F8VNX4 F8W186 H3BRM2 P26010 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000338737.4 | ITGB7-201 | 2324 | 650aa | ENSP00000345501.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VNX4 F8W186 H3BRM2 P26010 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000550743.2 | ITGB7-013 | 2138 | 650aa | ENSP00000455374.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VNX4 F8W186 H3BRM2 P26010 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000551319.1 | ITGB7-014 | 729 | 117aa | ENSP00000456446.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000552972.1 | ITGB7-011 | 607 | 158aa | ENSP00000450366.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VNX4 F8W186 H3BRM2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000549086.2 | ITGB7-007 | 576 | 88aa | ENSP00000446703.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8W186 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000552935.1 | ITGB7-006 | 513 | 93aa | ENSP00000456305.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8W186 H3BRM2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000542497.1 | ITGB7-002 | 1841 | 471aa | ENSP00000437375.1 | Nonsense mediated decay | F5H6T4 F8VNX4 F8W186 H3BRM2 | - | - | |
| ENST00000589179.1 | ITGB7-016 | 1707 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000549462.1 | ITGB7-001 | 1526 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000551887.2 | ITGB7-008 | 760 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000548706.1 | ITGB7-009 | 651 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000549196.1 | ITGB7-015 | 558 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000548269.1 | ITGB7-012 | 486 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |