Transcript: ENST00000536390.1 GLTP-003

Description

glycolipid transfer protein [Source:HGNC Symbol;Acc:24867]

Location

About this transcript

This transcript has 6 exons, is annotated with 5 domains and features, is associated with 11043 variant alleles and maps to 183 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000318348.4	GLTP-001	2356	209aa	ENSP00000315263.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9136	E7CEM8 Q9NZD2	NM_016433.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544393.1	GLTP-004	914	190aa	ENSP00000445919.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7CEM8 F5H0U5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540772.1	GLTP-005	560	183aa	ENSP00000440136.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000537066.1	GLTP-002	791	67aa	ENSP00000438128.1	Nonsense mediated decay		E7CEM8 F5GZ49	-	-
ENST00000536390.1	GLTP-003	583	67aa	ENSP00000441537.1	Nonsense mediated decay		E7CEM8 F5GZ49	-	-

Summary

Statistics

Exons: 6, Coding exons: 3, Transcript length: 583 bps, Translation length: 67 residues

Version

ENST00000536390.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000403281 (version 1)