Transcript: ENST00000403593.4 SDSL-002

Description

serine dehydratase-like [Source:HGNC Symbol;Acc:30404]

Gene Synonyms

SDH 2, SDS-RS1, TDH

Location

Chromosome 12: 113,860,042-113,876,081 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 10 domains and features, is associated with 7678 variant alleles and maps to 347 oligo probes.

Gene

This transcript is a product of gene ENSG00000139410.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000403593.4	SDSL-002	1449	329aa	ENSP00000385790.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9170	F8VYZ3 F8VZ97 Q96GA7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000345635.4	SDSL-001	1397	329aa	ENSP00000341117.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9170	F8VYZ3 F8VZ97 Q96GA7	NM_138432.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000546672.1	SDSL-006	839	225aa	ENSP00000449136.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000553248.1	SDSL-004	589	172aa	ENSP00000448868.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VYZ3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000547802.1	SDSL-005	544	29aa	ENSP00000446867.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VZ97	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000551760.1	SDSL-003	409	60aa	ENSP00000448950.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YIA2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 1,449 bps, Translation length: 329 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96GA7

CCDS

This transcript is a member of the Human CCDS set: CCDS9170

Version

ENST00000403593.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000404782 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000403593.4 SDSL-002

Summary