Transcript: ENST00000514489.1 PAPSS1-003

Description

3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Source:HGNC Symbol;Acc:8603]

Gene Synonyms

ATPSK1, PAPSS, SK1

Location

Chromosome 4: 108,608,268-108,641,382 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 13584 variant alleles and maps to 171 oligo probes.

Gene

This transcript is a product of gene ENSG00000138801.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000265174.4	PAPSS1-001	2731	624aa	ENSP00000265174.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3676	O43252 Q4W5F0 Q4W5H3 Q6IAX6	NM_005443.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000511304.1	PAPSS1-002	927	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000502431.1	PAPSS1-006	903	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000514489.1	PAPSS1-003	579	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000504987.1	PAPSS1-004	492	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000512641.1	PAPSS1-005	466	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000514815.1	PAPSS1-008	296	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000506544.1	PAPSS1-007	577	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 579 bps,

Version

ENST00000514489.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000363704 (version 1)

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Recent locations

Transcript: ENST00000514489.1 PAPSS1-003

Summary