Transcript: ENST00000559805.1 PARP16-004

Description

poly (ADP-ribose) polymerase family, member 16 [Source:HGNC Symbol;Acc:26040]

Gene Synonyms

ARTD15, C15orf30, FLJ20509, FLJ25281, pART15

Location

About this transcript

This transcript has 4 exons, is annotated with 5 domains and features, is associated with 11880 variant alleles and maps to 83 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000261888.6	PARP16-001	2731	323aa	ENSP00000261888.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10204	Q8N5Y8	NM_017851.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000444347.2	PARP16-002	2352	207aa	ENSP00000396118.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8N5Y8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000559805.1	PARP16-004	678	72aa	ENSP00000457982.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000558873.1	PARP16-005	838	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000560149.1	PARP16-003	823	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 678 bps, Translation length: 72 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000559805.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000418474 (version 2)