Transcript: ENST00000489652.1 PARP9-006

Description

poly (ADP-ribose) polymerase family, member 9 [Source:HGNC Symbol;Acc:24118]

Gene Synonyms

ARTD9, BAL, BAL1, MGC:7868

Location

Chromosome 3: 122,246,808-122,264,850 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 7899 variant alleles and maps to 278 oligo probes.

Gene

This transcript is a product of gene ENSG00000138496.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000360356.2	PARP9-001	3198	854aa	ENSP00000353512.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3014	Q658Y0 Q8IXQ6	NM_031458.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000462315.1	PARP9-003	6769	710aa	ENSP00000418894.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54633	Q8IXQ6	NM_001146106.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000477522.2	PARP9-002	3128	819aa	ENSP00000419506.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54634	Q658Y0 Q8IXQ6	NM_001146105.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000471785.1	PARP9-005	3040	819aa	ENSP00000419001.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54634	Q658Y0 Q8IXQ6	NM_001146104.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000492382.1	PARP9-004	1837	399aa	ENSP00000417664.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G5E9U8 Q658Y0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000466126.1	PARP9-007	567	115aa	ENSP00000419626.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9K0E5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000489652.1	PARP9-006	2642	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 2,642 bps,

Version

ENST00000489652.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000355962 (version 1)

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Transcript: ENST00000489652.1 PARP9-006

Summary