Transcript: ENST00000294954.7 LHCGR-001

Description

luteinizing hormone/choriogonadotropin receptor [Source:HGNC Symbol;Acc:6585]

Gene Synonyms

HHG, LCGR, LGR2, LH/CG-R, LH/CGR, LHR, LHRHR, LSH-R, ULG5

Location

Chromosome 2: 48,913,914-48,982,832 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 46 domains and features, is associated with 35578 variant alleles and maps to 490 oligo probes.

Gene

This transcript is a product of gene ENSG00000138039.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000294954.7	LHCGR-001	3044	699aa	ENSP00000294954.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1842	P22888 Q4ZFZ4 Q53S49	NM_000233.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000344775.3	LHCGR-201	2899	637aa	ENSP00000344301.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PDH1 Q4ZFZ4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000428232.1	LHCGR-007	2174	175aa	ENSP00000403748.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C226	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000405626.1	LHCGR-003	2073	672aa	ENSP00000386033.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ENI1 Q4ZFZ4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000403273.1	LHCGR-004	1921	329aa	ENSP00000385847.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ESK4 Q4ZFZ4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000401907.1	LHCGR-006	1477	325aa	ENSP00000385406.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EQB5 Q4ZFZ4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000602369.1	LHCGR-009	847	208aa	ENSP00000473498.1	Nonsense mediated decay		R4GN57	-	-
ENST00000420913.3	LHCGR-010	1205	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477576.1	LHCGR-008	381	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 3,044 bps, Translation length: 699 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P22888

CCDS

This transcript is a member of the Human CCDS set: CCDS1842

Version

ENST00000294954.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000251364 (version 4)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000294954.7 LHCGR-001

Summary