Transcript: ENST00000370759.3 GIPC2-001

Description

GIPC PDZ domain containing family, member 2 [Source:HGNC Symbol;Acc:18177]

Gene Synonyms

FLJ20075, SEMCAP-2, SEMCAP2

Location

About this transcript

This transcript has 6 exons, is annotated with 11 domains and features, is associated with 36964 variant alleles and maps to 459 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000370759.3	GIPC2-001	3847	315aa	ENSP00000359795.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS685	Q8TF65	NM_017655.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000476882.1	GIPC2-002	312	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 3,847 bps, Translation length: 315 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8TF65

CCDS

This transcript is a member of the Human CCDS set: CCDS685

Version

ENST00000370759.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000098629 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.