Transcript: ENST00000603526.1 FNBP1L-004

Description

formin binding protein 1-like [Source:HGNC Symbol;Acc:20851]

Gene Synonyms

C1orf39, FLJ20275, TOCA1

Location

Chromosome 1: 94,009,383-94,014,871 forward strand.

About this transcript

This transcript has 4 exons, is associated with 2236 variant alleles and maps to 92 oligo probes.

Gene

This transcript is a product of gene ENSG00000137942.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000271234.7	FNBP1L-202	4212	605aa	ENSP00000271234.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53343	B4DKY5 B4DSI7 B4DSW1 J3QSS4	NM_001164473.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000260506.8	FNBP1L-201	5341	551aa	ENSP00000260506.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53344	Q5T0N5	NM_017737.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000370256.4	FNBP1L-203	4197	600aa	ENSP00000359278.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DKY5 Q5T0N5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000370253.2	FNBP1L-001	3889	547aa	ENSP00000359275.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS60192	B4DKY5 Q5T0N5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000604705.1	FNBP1L-002	1830	609aa	ENSP00000473921.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		S4R347	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000424449.2	FNBP1L-003	1518	451aa	ENSP00000397451.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DKY5 B4DSI7 B4DSW1	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000603526.1	FNBP1L-004	656	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 656 bps,

Version

ENST00000603526.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000468870 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000603526.1 FNBP1L-004

Summary