Transcript: ENST00000490377.1 BCAR3-007

Description

breast cancer anti-estrogen resistance 3 [Source:HGNC Symbol;Acc:973]

Gene Synonyms

NSP2, SH2D3B

Location

Chromosome 1: 94,054,640-94,055,935 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 591 variant alleles and maps to 48 oligo probes.

Gene

This transcript is a product of gene ENSG00000137936.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000370244.1	BCAR3-003	3217	825aa	ENSP00000359264.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS745	B3KNL6 O75815	NM_001261408.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000370243.1	BCAR3-002	3200	825aa	ENSP00000359263.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS745	B3KNL6 O75815	NM_001261409.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000260502.6	BCAR3-001	3171	825aa	ENSP00000260502.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS745	B3KNL6 O75815	NM_003567.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000370247.3	BCAR3-004	2823	734aa	ENSP00000359267.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58010	B3KNL6 O75815	NM_001261410.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539242.1	BCAR3-201	2160	501aa	ENSP00000441343.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O75815	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000466632.1	BCAR3-006	887	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000469315.1	BCAR3-009	490	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000490377.1	BCAR3-007	467	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000479503.2	BCAR3-008	321	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000538653.1	BCAR3-005	900	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 467 bps,

Version

ENST00000490377.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000028424 (version 1)

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Transcript: ENST00000490377.1 BCAR3-007

Summary