Transcript: ENST00000559924.1 SLC28A2-004

Description

solute carrier family 28 (concentrative nucleoside transporter), member 2 [Source:HGNC Symbol;Acc:11002]

Gene Synonyms

CNT2, HCNT2, HsT17153, SPNT1

Location

About this transcript

This transcript has 7 exons, is annotated with 4 domains and features, is associated with 2076 variant alleles and maps to 159 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000347644.3	SLC28A2-001	2464	658aa	ENSP00000315006.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10121	O43868	NM_004212.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000560438.1	SLC28A2-003	581	193aa	ENSP00000454074.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YNM6	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000559924.1	SLC28A2-004	769	71aa	ENSP00000454046.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000560767.1	SLC28A2-002	1567	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 2, Transcript length: 769 bps, Translation length: 71 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000559924.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000416356 (version 1)