Transcript: ENST00000462816.1 ITPKA-003

Description

inositol-trisphosphate 3-kinase A [Source:HGNC Symbol;Acc:6178]

Gene Synonyms

IP3-3KA, IP3KA

Location

About this transcript

This transcript has 6 exons, is associated with 1102 variant alleles and maps to 330 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000260386.5	ITPKA-001	1822	461aa	ENSP00000260386.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10076	P23677	NM_002220.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000425927.1	ITPKA-002	852	260aa	ENSP00000396560.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JC74	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000462816.1	ITPKA-003	854	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000491007.1	ITPKA-004	507	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 854 bps,

Version

ENST00000462816.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000258280 (version 1)