Transcript: ENST00000360497.4 TRPC6-003

Description

transient receptor potential cation channel, subfamily C, member 6 [Source:HGNC Symbol;Acc:12338]

Gene Synonyms

FSGS2, TRP6

Location

Chromosome 11: 101,323,686-101,454,234 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 31 domains and features, is associated with 59409 variant alleles and maps to 481 oligo probes.

Gene

This transcript is a product of gene ENSG00000137672.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000344327.3	TRPC6-001	4612	931aa	ENSP00000340913.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8311	B3KNL3 Q9Y210	NM_004621.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000532133.1	TRPC6-004	2648	853aa	ENSP00000435574.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJN4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000360497.4	TRPC6-003	2631	876aa	ENSP00000353687.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9Y210	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000348423.4	TRPC6-002	2448	815aa	ENSP00000343672.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9Y210	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000526713.1	TRPC6-007	359	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000532184.1	TRPC6-005	645	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000527240.1	TRPC6-006	425	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 2,631 bps, Translation length: 876 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y210

Version

ENST00000360497.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000394773 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000360497.4 TRPC6-003

Summary