Transcript: ENST00000519494.1 TGS1-003

Description

trimethylguanosine synthase 1 [Source:HGNC Symbol;Acc:17843]

Gene Synonyms

HCA137, NCOA6IP, PIMT, PIPMT

Location

About this transcript

This transcript has 4 exons, is associated with 3983 variant alleles and maps to 104 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000260129.5	TGS1-001	3782	853aa	ENSP00000260129.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34894	Q96RS0	NM_024831.6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000523948.1	TGS1-002	3159	53aa	ENSP00000430467.1	Nonsense mediated decay		E5RJW7	-	-
ENST00000519494.1	TGS1-003	550	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 550 bps,

Version

ENST00000519494.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000378154 (version 1)