Transcript: ENST00000260129.5 TGS1-001

Description

trimethylguanosine synthase 1 [Source:HGNC Symbol;Acc:17843]

Gene Synonyms

HCA137, NCOA6IP, PIMT, PIPMT

Location

About this transcript

This transcript has 13 exons, is annotated with 11 domains and features, is associated with 24269 variant alleles and maps to 610 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000260129.5	TGS1-001	3782	853aa	ENSP00000260129.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34894	Q96RS0	NM_024831.6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000523948.1	TGS1-002	3159	53aa	ENSP00000430467.1	Nonsense mediated decay		E5RJW7	-	-
ENST00000519494.1	TGS1-003	550	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 3,782 bps, Translation length: 853 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96RS0

CCDS

This transcript is a member of the Human CCDS set: CCDS34894

Version

ENST00000260129.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000378152 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.