Transcript: ENST00000260045.3 PRKRIR-001

Description

protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor) [Source:HGNC Symbol;Acc:9440]

Gene Synonyms

DAP4, P52RIPK, P52rIPK, THAP0, THAP12

Location

About this transcript

This transcript has 5 exons, is annotated with 12 domains and features, is associated with 13644 variant alleles and maps to 453 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000260045.3	PRKRIR-001	3300	761aa	ENSP00000260045.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8243	B4DS64 O43422	NM_004705.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000528993.1	PRKRIR-003	882	79aa	ENSP00000433966.1	Nonsense mediated decay		E9PSI2	-	-
ENST00000531878.1	PRKRIR-004	537	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000529901.1	PRKRIR-002	6795	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000525277.1	PRKRIR-005	621	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 3,300 bps, Translation length: 761 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O43422

CCDS

This transcript is a member of the Human CCDS set: CCDS8243

Version

ENST00000260045.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000383188 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.