Transcript: ENST00000372589.3 SLC22A7-001

Description

solute carrier family 22 (organic anion transporter), member 7 [Source:HGNC Symbol;Acc:10971]

Gene Synonyms

NLT, OAT2

Location

Chromosome 6: 43,266,002-43,273,276 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 18 domains and features, is associated with 3641 variant alleles and maps to 560 oligo probes.

Gene

This transcript is a product of gene ENSG00000137204.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000372585.5	SLC22A7-004	2555	548aa	ENSP00000361666.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4893	Q9Y694	NM_153320.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000372589.3	SLC22A7-001	2549	546aa	ENSP00000361670.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4892	Q9Y694	NM_006672.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000372574.3	SLC22A7-003	1822	539aa	ENSP00000361655.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9Y694	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000449231.1	SLC22A7-006	933	278aa	ENSP00000411818.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T051	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000451757.1	SLC22A7-007	846	147aa	ENSP00000416052.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T047	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000436107.1	SLC22A7-005	658	211aa	ENSP00000393836.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000498232.1	SLC22A7-002	1339	235aa	ENSP00000434707.1	Nonsense mediated decay		Q8WWC3	-	-
ENST00000487175.1	SLC22A7-008	847	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480882.1	SLC22A7-009	696	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 2,549 bps, Translation length: 546 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y694

CCDS

This transcript is a member of the Human CCDS set: CCDS4892

Version

ENST00000372589.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000040585 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000372589.3 SLC22A7-001

Summary