Transcript: ENST00000259607.2 CCL21-002

Description

chemokine (C-C motif) ligand 21 [Source:HGNC Symbol;Acc:10620]

Gene Synonyms

6Ckine, CKb9, ECL, SCYA21, SLC, TCA4, exodus-2

Location

About this transcript

This transcript has 4 exons, is annotated with 9 domains and features, is associated with 626 variant alleles and maps to 316 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000259607.2	CCL21-002	852	134aa	ENSP00000259607.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6571	O00585 Q5VZ73 Q6ICR7	NM_002989.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000378792.1	CCL21-001	599	124aa	ENSP00000368069.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5VZ73	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 852 bps, Translation length: 134 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O00585

CCDS

This transcript is a member of the Human CCDS set: CCDS6571

Version

ENST00000259607.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000052245 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.