Transcript: ENST00000259154.4 KCTD3-001

Description

potassium channel tetramerization domain containing 3 [Source:HGNC Symbol;Acc:21305]

Gene Synonyms

NY-REN-45

Location

About this transcript

This transcript has 18 exons, is annotated with 18 domains and features, is associated with 22764 variant alleles and maps to 736 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000259154.4	KCTD3-001	3931	815aa	ENSP00000259154.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1515	B4DJX2 Q9Y597	NM_016121.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000448333.1	KCTD3-003	751	213aa	ENSP00000396726.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000452413.1	KCTD3-005	589	168aa	ENSP00000399962.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000495537.1	KCTD3-002	2722	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465650.1	KCTD3-004	652	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 18, Coding exons: 18, Transcript length: 3,931 bps, Translation length: 815 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y597

CCDS

This transcript is a member of the Human CCDS set: CCDS1515

Version

ENST00000259154.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000089871 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.