Transcript: ENST00000316193.8 CSH1-001

Description

chorionic somatomammotropin hormone 1 (placental lactogen) [Source:HGNC Symbol;Acc:2440]

Gene Synonyms

CS-1, CS-5, CSA, CSHP1, CSL, CSMT, FLJ75407, GH, GH-N, GHN, IGHD1B, PL, hCS-1, hCS-A, hCS-L, hGH-N

Location

Chromosome 17: 61,972,278-61,974,013 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 14 domains and features, is associated with 1186 variant alleles and maps to 1447 oligo probes.

Gene

This transcript is a product of gene ENSG00000136488.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000316193.8	CSH1-001	900	217aa	ENSP00000316416.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11649	A8K6C2 P01243 P78451 Q7KZ35	NM_001317.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000329882.8	CSH1-003	1073	256aa	ENSP00000333268.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NFB4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000453363.3	CSH1-201	618	122aa	ENSP00000402517.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1A4H2 Q7KZ35	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000558284.1	CSH1-005	1586	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000558661.1	CSH1-006	565	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 900 bps, Translation length: 217 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P01243

CCDS

This transcript is a member of the Human CCDS set: CCDS11649

Version

ENST00000316193.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000416040 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000316193.8 CSH1-001

Summary