Transcript: ENST00000576179.1 MYCBPAP-013

Description

MYCBP associated protein [Source:HGNC Symbol;Acc:19677]

Gene Synonyms

AMAP-1, AMAP1, DKFZp434N1415

Location

Chromosome 17: 48,585,810-48,593,454 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 2 domains and features, is associated with 3959 variant alleles and maps to 98 oligo probes.

Gene

This transcript is a product of gene ENSG00000136449.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000323776.5	MYCBPAP-001	3186	984aa	ENSP00000323184.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32680	Q8TBZ2	NM_032133.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000436259.2	MYCBPAP-201	3111	942aa	ENSP00000397209.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8TBZ2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000419930.1	MYCBPAP-004	1640	89aa	ENSP00000407719.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JZX1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000452039.1	MYCBPAP-006	947	314aa	ENSP00000407145.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JXR6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000576179.1	MYCBPAP-013	537	146aa	ENSP00000459714.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L2I8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000488432.1	MYCBPAP-011	467	106aa	ENSP00000464992.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000437498.1	MYCBPAP-002	3108	954aa	ENSP00000414583.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000458692.1	MYCBPAP-005	753	97aa	ENSP00000397686.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000485169.1	MYCBPAP-009	702	108aa	ENSP00000465746.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000477744.1	MYCBPAP-010	427	48aa	ENSP00000465337.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000468821.1	MYCBPAP-007	444	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470609.1	MYCBPAP-003	2092	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000459754.1	MYCBPAP-008	571	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000573066.1	MYCBPAP-012	334	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 537 bps, Translation length: 146 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000576179.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000436886 (version 1)

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Transcript: ENST00000576179.1 MYCBPAP-013

Summary