Transcript: ENST00000458191.1 HUS1-003

Description

HUS1 checkpoint homolog (S. pombe) [Source:HGNC Symbol;Acc:5309]

Gene Synonyms

hHUS1

Location

Chromosome 7: 48,003,917-48,019,150 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 8 domains and features, is associated with 7332 variant alleles and maps to 530 oligo probes.

Gene

This transcript is a product of gene ENSG00000136273.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000258774.5	HUS1-001	2935	280aa	ENSP00000258774.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34635	A4D2F2 B4DFI9 C9JA95 C9JCK8 O60921	NM_004507.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000432325.1	HUS1-005	1125	259aa	ENSP00000416588.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DFI9 C9JA95 C9JCK8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000432627.1	HUS1-011	627	183aa	ENSP00000404855.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JA95 C9JCK8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000446009.1	HUS1-004	579	145aa	ENSP00000398806.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JA95	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000436444.1	HUS1-002	2121	280aa	ENSP00000403844.1	Nonsense mediated decay	CCDS34635	A4D2F2 B4DFI9 C9JA95 C9JCK8 O60921	-	-
ENST00000458191.1	HUS1-003	1304	259aa	ENSP00000400727.1	Nonsense mediated decay		B4DFI9 C9JA95 C9JCK8	-	-
ENST00000442024.1	HUS1-008	1058	105aa	ENSP00000404348.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000433977.1	HUS1-007	774	160aa	ENSP00000405175.1	Nonsense mediated decay		F8WAW9	-	-
ENST00000468868.1	HUS1-006	548	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 7, Transcript length: 1,304 bps, Translation length: 259 residues

Version

ENST00000458191.1

Type

Nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000340953 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000458191.1 HUS1-003

Summary