Transcript: ENST00000258648.2 MED4-001

Description

mediator complex subunit 4 [Source:HGNC Symbol;Acc:17903]

Gene Synonyms

ARC36, DRIP36, HSPC126, TRAP36, VDRIP

Location

About this transcript

This transcript has 7 exons, is annotated with 7 domains and features, is associated with 8731 variant alleles and maps to 513 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000258648.2	MED4-001	2022	270aa	ENSP00000258648.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9408	Q9NPJ6	NM_014166.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000378586.1	MED4-002	931	224aa	ENSP00000367849.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59241	Q9NPJ6	NM_001270629.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000417167.1	MED4-003	911	238aa	ENSP00000413595.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T911	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000495013.1	MED4-005	460	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 2,022 bps, Translation length: 270 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NPJ6

CCDS

This transcript is a member of the Human CCDS set: CCDS9408

Version

ENST00000258648.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000044863 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.